dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02939
Location and strand information: 62 - 1537 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel-binding periplasmic protein

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02940
Location and strand information: 1596 - 2534 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel transport system permease protein NikB

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02941
Location and strand information: 2531 - 3352 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel transport system permease protein NikC

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02942
Location and strand information: 3423 - 4400 (+)
Family: 3.A.1.5.12
Protein type: TC
Protein description: Dipeptide transport ATP-binding protein DppD

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02943
Location and strand information: 4390 - 5376 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02944
Location and strand information: 5525 - 6583 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02945
Location and strand information: 6798 - 8735 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.8656
Protein molecular weight: 74034.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02946
Location and strand information: 8748 - 10181 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: putative arabinose-binding protein

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02947
Location and strand information: 10493 - 11434 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02948
Location and strand information: 11439 - 12296 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000287_45|CGC1
Gene ID: MGYG000000287_02949
Location and strand information: 12311 - 13831 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.2584
Protein molecular weight: 57638.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000287_02939	Nickel-binding periplasmic protein	TC	62	1537	+	3.A.1.5.3
MGYG000000287_02940	Nickel transport system permease protein NikB	TC	1596	2534	+	3.A.1.5.3
MGYG000000287_02941	Nickel transport system permease protein NikC	TC	2531	3352	+	3.A.1.5.3
MGYG000000287_02942	Dipeptide transport ATP-binding protein DppD	TC	3423	4400	+	3.A.1.5.12
MGYG000000287_02943	Oligopeptide transport ATP-binding protein OppF	TC	4390	5376	+	3.A.1.5.20
MGYG000000287_02944	Catabolite control protein A	TF	5525	6583	+	LacI
MGYG000000287_02945	Non-reducing end beta-L-arabinofuranosidase	CAZyme	6798	8735	+	GH127
MGYG000000287_02946	putative arabinose-binding protein	TC	8748	10181	+	3.A.1.1.34
MGYG000000287_02947	L-arabinose transport system permease protein AraP	TC	10493	11434	+	3.A.1.1.34
MGYG000000287_02948	L-arabinose transport system permease protein AraQ	TC	11439	12296	+	3.A.1.1.34
MGYG000000287_02949	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	12311	13831	+	GH51
Protein ID	Protein Name	Type	Start	End	Strand	Signature